Techniques
- Bioinformatics and Computational Biology protocols for analysis of Next Generation Sequencing (NGS) and Array Data
Range of services
- Bioinformatics and Computational Biology protocols for analysis of Next Generation Sequencing (NGS) and Array Data
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Alignment services for De novo genome Assembly and/or Mapping of processed reads
- Automatic annotation and functional analysis of genes and transcripts
- Variation Detection ( SNP’s and Indle)
- Genotyping
- Small and Micro RNAs characterization
- Normalization and Differential Expression analysis of both NGS and array
- Diversity and phylogenetic analysis
- High-Throughput real-time PCR analysis
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User-specific consulting and tailored-made support on downstream analysis
Examples of application
- Genome and transcriptome annotation, RNA-seq, GO-seq, Microarray analysis (expression, ChIP-chip, tiling, miRNA and proteins), Chip-seq, sRNAs expression analysis, Metagenomics and Metatranscriptomics.
Equipment
- Silicon Graphics cluster (10 x Intel Xeon Quad-Core 2.5GHz, 80 GB RAM, 22 TB SAN, RHE Linux 5)
- Work stations equipped with Linux CentOS operating system
Any person applying for the first time for any services by CCiTUB must enter as a new user. For this purpose it is necessary to fill in an application form which can be downloaded from http://www.ccit.ub.edu/EN/m4.html. The form must be sent to
ISO 9001:2008. The CCiTUB have well-established a system of management of the quality based on the ISO norm 9001, which also satisfies the Good Manufacturing Practice requirements (GMP).
Recognition by the Food and Drug Administration as a contract laboratory to perform drug tests.
Acknowledged laboratory Register of Agroalimentary Laboratories of Catalonia.